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Basic Java Persistence API Best Practices

By: Dustin Marx
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Consider and employ these simple approaches to make your Java Persistence API applications more maintainable.

The Java Persistence API (JPA), which is part of the Enterprise JavaBeans (EJB) 3.0 spec and is now the standard API for persistence and object/relational mapping for the Java EE platform, provides several advantages to Java developers for data-binding purposes. First, it provides a common API for persistence in both the standard and enterprise Java worlds. Second, the JPA provides a standard API that can be used for multiple different data stores. Third, JPA provides object-relational mapping technology that can be applied in the same manner to these various contexts (standard Java, enterprise Java, and various databases).

This article provides an overview of how to fully enjoy these advantages of the Java Persistence API. Common Themes Behind These Recommendations

A few general themes permeate most of the recommended approaches outlined in this article:
* The approaches outlined here focus on the readability and maintainability of JPA-based application code.
* Portability between JPA provider implementations is generally desirable. Even when implementation portability cannot be maintained, provider-specific functionality should be easily identifiable and isolated from common functionality.
* JPA code should be portable across datasources. When database-specific features must be used, they should be isolated in configuration files rather than tainting the code.
* JPA-based code should usually work in Java SE and Java EE contexts.
* The most important characteristic of maintainable and readable code is the quality of the code itself. Clean code that speaks for itself is preferable to annotations. Self-explanatory code and annotations are preferable to comments that are necessary to explain convoluted code. * The practices discussed in this article generally require very little extra effort to implement and provide long-term maintenance benefits at little or no cost in initial development time.


With the general themes listed above in mind, we move on to some recommended practices for effective JPA-based applications.

Favor Conventions over Exceptions

In an ideal world, the default configuration settings would always be exactly what we wanted. Our use of “configuration by exception” would not require any exceptions to be configured. We can approach this ideal world by minimizing the frequency and severity of our deviations from the assumed configuration. Although there is nothing inherently wrong about providing specific exceptions to the default configuration settings, doing so requires more effort on our part to denote and maintain the metadata describing the exceptions to the default configuration.

Carefully Consider and Select a Metadata Configuration Strategy

For many organizations, it makes the most sense to use annotations in the code during development, because in-code configuration is significantly more convenient for developers. For some of these organizations, it may be preferable to use external XML files during deployment and production, especially if the deployment team is different from the development team.

JPA enables XML-based configuration data to be used as an alternative to annotations, but it is even more powerful to use the XML configuration approach to override the annotations. Using the override process enables developers to take advantage of annotations during source code development while allowing these in-code annotations to be overridden outside the code at production time. As I discussed in significantly greater detail in my OTN article “Better JPA, Better JAXB, and Better Annotations Processing with Java SE 6,” Java SE 6 provides built-in annotation processing that can be used to build the mapping XML file from the in-code annotations. This approach is appropriate for organizations whose development staff benefits from in-code annotations but whose deployment staff benefits from external configuration.

For configuration that is likely to change often for various deployments of the software, external configuration makes the most sense. For configuration that is fairly static across multiple deployments, in-code annotations can be defined once and there is no need to change them often.

There are some configuration settings that must be expressed in the XML configuration files rather than via in-code annotations. One example of such configuration is the definition of default entity listeners that cover all entities within a persistence unit.

Another situation in which external configuration should be used instead of in-code annotations is for vendor-specific settings. Placing implementation-specific settings in external configuration files keeps the code portable and clean. Generally, JPA vendor-specific properties should be declared with name/value properties in the persistence.xml file rather than within source code.

SQL statements that are specific to a particular database can also be placed outside the source code, in the XML descriptor file. If database-specific SQL statements must be used, it is best to specify them as native named queries and annotate them in XML for the general persistence unit rather than in a particular entity’s Java source code file.

JPA 1.0 specification co-lead Mike Keith covered many of the trade-offs associated with an XML metadata strategy (XML strategy) versus an in-source metadata strategy (annotations strategy) in the OTN column “To Annotate or Not” (see “Additional Resources”).

Access Fields Rather Than Properties

I prefer to specify object-relational mapping by annotating entity fields directly, rather than annotating get/set methods (properties), for several reasons. No single reason overwhelmingly favors specifying persistence via fields rather than via properties, but the combined benefits of field persistence specification make it the more attractive approach.

Because persistence is all about storing, updating, and retrieving the data itself, it seems cleaner to denote the persistence directly on the data rather than indirectly via the get and set methods. There is also no need to remember to mark the getter but not the setter for persistence. It is also cleaner to mark a field as transient to indicate that it should not be persisted than to mark a get() method as transient. By using fields rather than properties, you don’t need to ensure that the get and set methods follow the JavaBeans naming conventions related to the underlying fields. I prefer the ability to look at a class’s data members and determine each member’s name, each member’s datatype, comments related to each data member, and each member’s persistence information all in one location.

The order of business logic and persistence in get/set methods is not guaranteed. Developers can leave business logic out of these methods, but if fields are annotated instead, it does not matter if business logic is added to the get or set methods later.

A developer may want methods that manipulate or retrieve more than one attribute at a time or that do not have “get” or “set” in their names. With field annotations, the developer has the freedom to write and name these methods as desired without the need to place the @Transient annotation or the “transient” keyword in front of methods not directly related to persistence. Favor @EmbeddedId for Composite Keys

I prefer using @EmbeddedId to designate composite keys, for three main reasons:

1. Use of @EmbeddedId is consistent with use of the @Embedded annotation on embedded Java classes that are not primary keys.

2. @EmbeddedId enables me to represent the composite key as a single key in my entity rather than making me annotate multiple data members in my entity with the @Id annotation.

3. The @EmbeddedId approach provides encapsulation of any @Column or other column mapping on the primary key columns in a single Java class. This is better than forcing the containing entity to handle object-relational mapping details for each column in the composite key.

In short, I prefer the @EmbeddedId approach for composite primary keys because of the grouping of primary-key-related details within the single @Embeddable class. This also makes it simple to access the primary key class as a single, cohesive unit rather than as individual pieces inside an entity.

The ideal approach is to use a single-value key, because this generally requires the least extra effort on the part of the JPA developer. Use Only Exact Datatypes for Primary Keys

The JPA specification warns against using approximate types, specifically floating types (float and double). In general, my preference with JPA is to use surrogate primary keys that are integers, whenever possible. Strive for Standard JPA Code

The following general guidelines for maintaining portable JPA code are based on warnings in the JPA specification regarding features that are optional or undefined.

Generally Relate Tables by References to Primary Keys

The JPA specification allows implementations to have columns from one table reference non-primary-key columns of another table, but JPA implementations are not required to support this. Therefore, for applications portable across different JPA implementations, it is best to relate tables via references from one table to the primary key column(s) of the other table. I prefer this as a general database principle anyway.

Use Portable Inheritance Mapping Strategies

Even if your JPA provider does implement the optional “table per concrete class” inheritance mapping strategy, it is best to avoid this if you need JPA provider portability.

It is also best to use a single inheritance mapping strategy within a given Java entity class hierarchy, because support for mixing multiple mapping inheritance strategies within a single class hierarchy is not required of JPA implementations. Other JPA Implementation Portability Issues

Beyond what is discussed here, the JPA specification points out additional issues to keep in mind when developing portable JPA-based applications. In general, anything cited in the specification as optional, undefined, or ambiguous or specifically called out as nonportable across JPA implementations should be avoided unless absolutely necessary. In many of these cases, the exceptions to portability are not difficult to avoid. (A good resource regarding portable JPA applications is the 2007 JavaOne conference presentation “Java Persistence API: Portability Do’s and Don’ts.” Another good resource on portable JPA applications is the article “Portable Persistence Using the EJB 3.0 Java Persistence API.” Both of these are listed under “Additional Resources.”)

Effectively Use Implementation-Specific Features

There are occasions when a JPA implementation might provide nonstandard features (“extensions”) that are highly useful.

Although it is generally desirable for applications to be as standards-based as possible to improve the ability to migrate them between various implementations of the standard, this does not mean that implementation-specific features should never be used. Instead, the costs and benefits of using an all-standards approach should be compared with the costs and benefits of employing the vendor-specific features.

The following issues should be considered when determining whether to use features and extensions specific to a particular JPA implementation.
* Does the JPA specification outline extension points that allow the vendor option to be used without loss of portability?
* Does the implementation-specific feature provide a significant benefit (better performance, easier development, or extra functionality) over using a more-standard approach?
* What is the likelihood of needing to use a different JPA implementation in the future for this application? Factors to consider include the implementation vendor’s support and future viability, licensing fees, and general experience with the product.

One example of making a trade-off decision by answering these questions is the use of Oracle TopLink Essentials’ logging mechanism in JPA-based applications. I am comfortable using this provider-specific feature, for the following reasons:
* Setting Oracle TopLink Essentials’ logging level to FINE allows SQL statements to be logged, which is invaluable for debugging.
* Oracle TopLink Essentials is the JPA reference implementation.
* JPA provides an extension mechanism for properties such as logging that keeps the provider-specific setting in the external persistence.xml file rather than in source code. This mechanism also ensures that other providers will simply ignore properties specific to Oracle TopLink.

Another example of a highly useful but provider-specific function is the use of the second-level cache, which is often vital to acceptable performance. Information on the reference implementation’s extensions is available in the “TopLink Essentials JPA Extensions Reference”

Strive for Standard SQL and Database Use

Using features specific to a certain database is riskier than using features specific to a certain JPA provider, because the database specifics are not typically handled as elegantly as the JPA provider specifics are.

Maintain database independence with standard JPA query language statements. A red flag for database-specific SQL statements in your code is the use of the @NamedNativeQuery and @NamedNativeQueries annotations (or their corresponding XML descriptor elements). Similarly, EntityManager.createNativeQuery method calls also indicate dependence on a specific database.

Effectively Use Database-Specific Features

Even when use of vendor-specific features is warranted, you can take steps to obviously identify and isolate these vendor specifics from the standardized database access.

I prefer to place database-specific queries in the XML deployment descriptors (one or more named-native-query elements) in an attempt to keep my actual code (including annotations) as free from vendor-specific code as possible. This enables me to isolate proprietary database code to the external descriptors rather than mingling it with my standards-oriented code. I also prefer to include my named-native-query XML elements as subelements of the root element of the object-relational mapping file(s), rather than as subelements of any particular entity.

Native named queries are scoped to the entire persistence unit, even when a particular native named query is defined in a particular entity’s Java class, so it is also considered a best practice to include some other unique identifier in the native named query’s name. If you place the native named queries together under the root element in the external XML mapping file, it is easier to visually detect naming collisions. A disadvantage of this approach is that it is less obvious which entity is returned from a query, but you can address this issue by including the returned entity’s name as part of the native named query.

Design JPA Code for Both the Java SE and Java EE Environments

An advantage of finally having a consistent API that works with both standard and enterprise Java is that we can write Java-based persistence layers that work with both standard and enterprise applications.

Effective layering can be used to ensure that our JPA-based database access (DAO) code can be used in both standard and enterprise Java contexts. To do this properly, entity classes and DAO layers should not perform transaction handling, because doing so would conflict with transactions provided by the enterprise Java application server. Transactions need to be pushed out of the entity classes to the client for standard Java environments.

The figure below demonstrates how the same entity class can be used for both standard and enterprise Java environments. Structuring the entities this way requires only a small amount of effort but allows a high degree of reuse of the entity class.

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